Gene detail information of Glyur000331s00020709.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77300.10histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific)
NRXP_004502539.10PREDICTED: histone-lysine N-methyltransferase ASHH2-like isoform X1 [Cicer arietinum]
COGYP_005439308.17.00E-20SET domain-containing protein [Rubrivivax gelatinosus IL144]
Swissprottr|Q2LAE1|ASHH2_ARATH0Histone-lysine N-methyltransferase ASHH2
trEMBLtr|K7KUK4|K7KUK4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12391.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003312546940030-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding

GO:0018024  histone-lysine N-methyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000331s00020709.1PF07496.10zf-CW98810351.20E-09
Glyur000331s00020709.1PF00856.23SET116012666.20E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.530
SRR1783600control10.541
SRR1783602moderate drought stress11.446
SRR1811619moderate drought stress11.464

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.745
DRR006520Root Summer glycyrrhizin high producing strain10.599
DRR006521Root Winter glycyrrhizin high producing strain13.562
DRR006522Root Winter glycyrrhizin high producing strain13.281
DRR006523Root Summer glycyrrhizin low producing strain12.849
DRR006524Root Summer glycyrrhizin low producing strain12.922
DRR006525Leaf Summer glycyrrhizin high producing strain12.259
DRR006526Leaf Summer glycyrrhizin high producing strain12.182

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.700
SRR2868004Drought Stress(Tissue:root)32.956
SRR2967015Control (Tissue:root)32.453

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.251
SRR9715740Leave17.310
SRR9715741Leave18.863
SRR9715739Root0.989
SRR9715742Root14.427
SRR9715743Root12.282

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.703
SRR8749028MeJA induced 9h31.011
SRR8749029MeJA induced 9h14.833
SRR8749030Uninduced24.858
SRR8749031Uninduced37.610
SRR8749032Uninduced20.093

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.241
SRR8400027Control-Root24.943

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved