Gene detail information of Glyur000332s00014987.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22170.12.00E-141Phosphoglycerate mutase family protein
NRKEH34889.10phosphoglycerate/bisphosphoglycerate mutase family protein [Medicago truncatula]
COGYP_007160.13.00E-97phosphoglyceromutase [Candidatus Protochlamydia amoebophila UWE25]
trEMBLtr|A0A072UYQ0|A0A072UYQ0_MEDTR0Phosphoglycerate/bisphosphoglycerate mutase family protein {ECO:0000313|EMBL:KEH34889.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00332122622126739+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01834PGAM, gpmA EC:5.4.2.11 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Glycine, serine and threonine metabolismmap00260
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006096  glycolytic process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004619  phosphoglycerate mutase activity

GO:0016868  intramolecular transferase activity, phosphotransferases


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000332s00014987.1PF00300.17His_Phos_1972821.20E-39


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.068
SRR1783600control10.953
SRR1783602moderate drought stress7.684
SRR1811619moderate drought stress7.608

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.463
DRR006520Root Summer glycyrrhizin high producing strain10.862
DRR006521Root Winter glycyrrhizin high producing strain7.559
DRR006522Root Winter glycyrrhizin high producing strain7.209
DRR006523Root Summer glycyrrhizin low producing strain10.210
DRR006524Root Summer glycyrrhizin low producing strain9.608
DRR006525Leaf Summer glycyrrhizin high producing strain5.575
DRR006526Leaf Summer glycyrrhizin high producing strain4.949

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.215
SRR2868004Drought Stress(Tissue:root)37.846
SRR2967015Control (Tissue:root)27.624

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.642
SRR9715740Leave13.645
SRR9715741Leave20.222
SRR9715739Root3.793
SRR9715742Root11.407
SRR9715743Root8.811

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.635
SRR8749028MeJA induced 9h5.658
SRR8749029MeJA induced 9h2.239
SRR8749030Uninduced16.030
SRR8749031Uninduced14.035
SRR8749032Uninduced3.376

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.599
SRR8400027Control-Root22.351

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved