Gene detail information of Glyur000334s00019184.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G75388.11.00E-13conserved peptide upstream open reading frame 5
NRKEH40186.11.15E-45BZIP transcription factor bZIP124 [Medicago truncatula]
Swissprottr|P24068|OCS1_MAIZE3.00E-19Ocs element-binding factor 1
trEMBLtr|A0A072VF03|A0A072VF03_MEDTR4.00E-46BZIP transcription factor bZIP124 {ECO:0000313|EMBL:KEH40186.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003342265023430-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000334s00019184.1PF00170.16bZIP_1441023.60E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control291.903
SRR1783600control304.204
SRR1783602moderate drought stress239.995
SRR1811619moderate drought stress241.605

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain226.460
DRR006520Root Summer glycyrrhizin high producing strain227.618
DRR006521Root Winter glycyrrhizin high producing strain14.196
DRR006522Root Winter glycyrrhizin high producing strain11.314
DRR006523Root Summer glycyrrhizin low producing strain123.898
DRR006524Root Summer glycyrrhizin low producing strain118.518
DRR006525Leaf Summer glycyrrhizin high producing strain8.408
DRR006526Leaf Summer glycyrrhizin high producing strain7.768

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)88.766
SRR2868004Drought Stress(Tissue:root)54.039
SRR2967015Control (Tissue:root)43.395

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.563
SRR9715740Leave7.911
SRR9715741Leave14.652
SRR9715739Root151.830
SRR9715742Root101.156
SRR9715743Root104.672

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.837
SRR8749028MeJA induced 9h2.799
SRR8749029MeJA induced 9h1.088
SRR8749030Uninduced10.889
SRR8749031Uninduced1.802
SRR8749032Uninduced3.242

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root159.863
SRR8400027Control-Root192.576

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved