Gene detail information of Glyur000334s00019188.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31940.14.00E-55cytochrome P450, family 82, subfamily C, polypeptide 4
NRKEH30996.11.57E-114cytochrome P450 family protein [Medicago truncatula]
COGYP_004303682.13.00E-29cytochrome P450 [Polymorphum gilvum SL003B-26A1]
Swissprottr|O49858|C82A3_SOYBN1.00E-82Cytochrome P450 82A3
trEMBLtr|A0A072UNP8|A0A072UNP8_MEDTR6.00E-115Cytochrome P450 family protein {ECO:0000313|EMBL:KEH30996.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003345905962671+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP82C4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000334s00019188.1PF00067.17p450232097.50E-56


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.583
SRR1783600control23.826
SRR1783602moderate drought stress31.016
SRR1811619moderate drought stress31.520

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.327
DRR006520Root Summer glycyrrhizin high producing strain8.673
DRR006521Root Winter glycyrrhizin high producing strain1.300
DRR006522Root Winter glycyrrhizin high producing strain0.830
DRR006523Root Summer glycyrrhizin low producing strain10.096
DRR006524Root Summer glycyrrhizin low producing strain9.337
DRR006525Leaf Summer glycyrrhizin high producing strain0.425
DRR006526Leaf Summer glycyrrhizin high producing strain0.321

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.904
SRR2868004Drought Stress(Tissue:root)16.245
SRR2967015Control (Tissue:root)10.242

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.947
SRR9715740Leave11.820
SRR9715741Leave20.866
SRR9715739Root10.949
SRR9715742Root15.476
SRR9715743Root15.717

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.223
SRR8749028MeJA induced 9h21.865
SRR8749029MeJA induced 9h8.061
SRR8749030Uninduced34.829
SRR8749031Uninduced20.109
SRR8749032Uninduced15.461

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.998
SRR8400027Control-Root15.872

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved