Gene detail information of Glyur000334s00019196.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66460.15.00E-97Glycosyl hydrolase superfamily protein
NRXP_003549439.14.48E-158PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Glycine max]
COGYP_003324408.12.00E-51glycoside hydrolase family protein [Thermobaculum terrenum ATCC BAA-798]
Swissprottr|Q9FJZ3|MAN7_ARATH1.00E-119Mannan endo-1,4-beta-mannosidase 7 (Precursor)
trEMBLtr|I1MXX7|I1MXX7_SOYBN2.00E-158Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G37090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0033498526103114-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19355MAN EC:3.2.1.78 Fructose and mannose metabolism map00051


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000334s00019196.1PF00150.13Cellulase652482.60E-08


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control66.046
SRR1783600control66.573
SRR1783602moderate drought stress97.031
SRR1811619moderate drought stress96.175

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.003
DRR006520Root Summer glycyrrhizin high producing strain25.254
DRR006521Root Winter glycyrrhizin high producing strain4.025
DRR006522Root Winter glycyrrhizin high producing strain3.258
DRR006523Root Summer glycyrrhizin low producing strain42.919
DRR006524Root Summer glycyrrhizin low producing strain42.506
DRR006525Leaf Summer glycyrrhizin high producing strain5.158
DRR006526Leaf Summer glycyrrhizin high producing strain5.074

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.945
SRR2868004Drought Stress(Tissue:root)24.400
SRR2967015Control (Tissue:root)24.804

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.693
SRR9715740Leave17.561
SRR9715741Leave18.199
SRR9715739Root56.520
SRR9715742Root66.035
SRR9715743Root58.384

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.052
SRR8749028MeJA induced 9h0.122
SRR8749029MeJA induced 9h0.044
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root156.306
SRR8400027Control-Root168.709

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved