Gene detail information of Glyur000334s00019197.2 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT5G42800.1 | 1.00E-102 | dihydroflavonol 4-reductase |
NR | AEF14420.1 | 1.91E-152 | dihydroflavonol 4-reductase [Onobrychis viciifolia] |
COG | YP_002015379.1 | 1.00E-34 | NAD-dependent epimerase/dehydratase [Prosthecochloris aestuarii DSM 271] |
Swissprot | tr|Q84KP0|DFRA_PYRCO | 6.00E-134 | Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase |
trEMBL | tr|K9K0I0|K9K0I0_ONOVI | 7.00E-153 | Dihydroflavonol 4-reductase {ECO:0000313|EMBL:AEF14420.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00334 | 109108 | 136440 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K13082 | DFR | EC:1.1.1.219 1.1.1.234 | Flavonoid biosynthesis | map00941 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000334s00019197.2 | PF01370.16 | Epimerase | 8 | 194 | 4.70E-23 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.019 |
SRR1783600 | control | 0.076 |
SRR1783602 | moderate drought stress | 0.024 |
SRR1811619 | moderate drought stress | 0.006 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.114 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.107 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.257 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.060 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.070 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.163 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 72.638 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 73.465 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 0.085 |
SRR2868004 | Drought Stress(Tissue:root) | 0.001 |
SRR2967015 | Control (Tissue:root) | 0.000 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 212.607 |
SRR9715740 | Leave | 19.464 |
SRR9715741 | Leave | 55.084 |
SRR9715739 | Root | 0.045 |
SRR9715742 | Root | 0.000 |
SRR9715743 | Root | 0.055 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 0.000 |
SRR8749028 | MeJA induced 9h | 0.000 |
SRR8749029 | MeJA induced 9h | 0.025 |
SRR8749030 | Uninduced | 0.018 |
SRR8749031 | Uninduced | 0.000 |
SRR8749032 | Uninduced | 0.032 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 0.013 |
SRR8400027 | Control-Root | 0.102 |