Gene detail information of Glyur000335s00017470.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G31350.22.00E-121Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
NRXP_003550149.10PREDICTED: uncharacterized protein LOC100306431 isoform X1 [Glycine max]
trEMBLtr|I1MWJ1|I1MWJ1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G29670.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00335157433165283+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000335s00017470.1PF02485.16Branch1082214.80E-37
Glyur000335s00017470.1PF02485.16Branch2453645.30E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.148
SRR1783600control17.399
SRR1783602moderate drought stress10.151
SRR1811619moderate drought stress10.123

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.775
DRR006520Root Summer glycyrrhizin high producing strain11.943
DRR006521Root Winter glycyrrhizin high producing strain0.471
DRR006522Root Winter glycyrrhizin high producing strain0.394
DRR006523Root Summer glycyrrhizin low producing strain5.463
DRR006524Root Summer glycyrrhizin low producing strain5.592
DRR006525Leaf Summer glycyrrhizin high producing strain5.302
DRR006526Leaf Summer glycyrrhizin high producing strain5.182

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)44.966
SRR2868004Drought Stress(Tissue:root)33.668
SRR2967015Control (Tissue:root)27.113

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.487
SRR9715740Leave11.740
SRR9715741Leave16.856
SRR9715739Root8.310
SRR9715742Root18.310
SRR9715743Root14.819

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.498
SRR8749028MeJA induced 9h8.603
SRR8749029MeJA induced 9h5.142
SRR8749030Uninduced2.064
SRR8749031Uninduced0.921
SRR8749032Uninduced1.649

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root32.504
SRR8400027Control-Root38.971

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved