Gene detail information of Glyur000336s00018088.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G42500.13.00E-174protein phosphatase 2A-3
NRXP_007205603.10hypothetical protein PRUPE_ppa009000mg [Prunus persica]
COGYP_001541554.13.00E-41metallophosphoesterase [Caldivirga maquilingensis IC-167]
Swissprottr|Q9XGH7|PP2A_TOBAC0Serine/threonine-protein phosphatase PP2A catalytic subunit
trEMBLtr|M5VZA9|M5VZA9_PRUPE0Serine/threonine-protein phosphatase {ECO:0000256|RuleBase:RU004273}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00336839413527-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04382PPP2C EC:3.1.3.16 mRNA surveillance pathway map03015
MAPK signaling pathway - flymap04013
TGF-beta signaling pathwaymap04350
Hippo signaling pathwaymap04390
Hippo signaling pathway -flymap04391
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Autophagy - animalmap04140
Autophagy - yeastmap04138
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Tight junctionmap04530
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728
Long-term depressionmap04730
Hepatitis Cmap05160
Chagas disease (American trypanosomiasis)map05142


Gene Ontology

molecular_function

GO:0016787  hydrolase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000336s00018088.1PF00149.23Metallophos502422.50E-41


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.283
SRR1783600control15.466
SRR1783602moderate drought stress13.636
SRR1811619moderate drought stress13.545

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.995
DRR006520Root Summer glycyrrhizin high producing strain27.871
DRR006521Root Winter glycyrrhizin high producing strain9.872
DRR006522Root Winter glycyrrhizin high producing strain9.688
DRR006523Root Summer glycyrrhizin low producing strain20.162
DRR006524Root Summer glycyrrhizin low producing strain20.067
DRR006525Leaf Summer glycyrrhizin high producing strain6.556
DRR006526Leaf Summer glycyrrhizin high producing strain6.633

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.777
SRR2868004Drought Stress(Tissue:root)26.779
SRR2967015Control (Tissue:root)29.088

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.514
SRR9715740Leave8.835
SRR9715741Leave10.493
SRR9715739Root24.356
SRR9715742Root20.855
SRR9715743Root22.122

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.407
SRR8749028MeJA induced 9h11.821
SRR8749029MeJA induced 9h10.984
SRR8749030Uninduced5.715
SRR8749031Uninduced3.099
SRR8749032Uninduced4.151

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root28.652
SRR8400027Control-Root27.114

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved