Gene detail information of Glyur000337s00026847.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G22420.11.00E-147Peroxidase superfamily protein
NRAFK40083.10unknown [Lotus japonicus]
Swissprottr|Q9SJZ2|PER17_ARATH0Peroxidase 17 (Precursor)
trEMBLtr|I3SIJ1|I3SIJ1_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK40083.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003371832422743+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000337s00026847.1PF00141.18peroxidase362811.40E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.489
SRR1783600control14.367
SRR1783602moderate drought stress13.358
SRR1811619moderate drought stress13.277

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.438
DRR006520Root Summer glycyrrhizin high producing strain22.750
DRR006521Root Winter glycyrrhizin high producing strain21.823
DRR006522Root Winter glycyrrhizin high producing strain21.797
DRR006523Root Summer glycyrrhizin low producing strain46.822
DRR006524Root Summer glycyrrhizin low producing strain46.465
DRR006525Leaf Summer glycyrrhizin high producing strain15.039
DRR006526Leaf Summer glycyrrhizin high producing strain14.709

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.632
SRR2868004Drought Stress(Tissue:root)15.801
SRR2967015Control (Tissue:root)27.559

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.366
SRR9715740Leave28.053
SRR9715741Leave22.709
SRR9715739Root6.383
SRR9715742Root11.310
SRR9715743Root9.094

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.260
SRR8749028MeJA induced 9h9.216
SRR8749029MeJA induced 9h8.214
SRR8749030Uninduced16.746
SRR8749031Uninduced5.824
SRR8749032Uninduced10.307

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.612
SRR8400027Control-Root13.271

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved