Gene detail information of Glyur000337s00026862.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G22870.10Protein kinase family protein with ARM repeat domain
NRAES87595.20ARM repeat kinase family protein [Medicago truncatula]
COGYP_003266816.13.00E-10serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
Swissprottr|Q60DG4|NEK4_ORYSJ2.00E-11Serine/threonine-protein kinase Nek4
trEMBLtr|G7JKS9|G7JKS9_MEDTR0ARM repeat kinase family protein {ECO:0000313|EMBL:AES87595.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00337153949165675-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005488  binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000337s00026862.1PF00069.20Pkinase1073441.20E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.658
SRR1783600control15.679
SRR1783602moderate drought stress15.192
SRR1811619moderate drought stress15.190

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.262
DRR006520Root Summer glycyrrhizin high producing strain16.868
DRR006521Root Winter glycyrrhizin high producing strain18.735
DRR006522Root Winter glycyrrhizin high producing strain18.359
DRR006523Root Summer glycyrrhizin low producing strain24.228
DRR006524Root Summer glycyrrhizin low producing strain24.392
DRR006525Leaf Summer glycyrrhizin high producing strain7.499
DRR006526Leaf Summer glycyrrhizin high producing strain7.298

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.960
SRR2868004Drought Stress(Tissue:root)21.472
SRR2967015Control (Tissue:root)21.433

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.505
SRR9715740Leave10.672
SRR9715741Leave15.937
SRR9715739Root6.879
SRR9715742Root22.571
SRR9715743Root21.027

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h24.321
SRR8749028MeJA induced 9h28.810
SRR8749029MeJA induced 9h27.139
SRR8749030Uninduced27.350
SRR8749031Uninduced49.409
SRR8749032Uninduced33.497

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.985
SRR8400027Control-Root20.433

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved