Gene detail information of Glyur000338s00015568.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34710.1 | 0 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
| NR | XP_003546255.1 | 0 | PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Glycine max] |
| Swissprot | tr|O04291|ATB14_ARATH | 0 | Homeobox-leucine zipper protein ATHB-14 |
| trEMBL | tr|I1MG30|I1MG30_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G13640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00338 | 78863 | 88447 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000338s00015568.1 | PF00046.24 | Homeobox | 22 | 80 | 3.60E-16 |
| Glyur000338s00015568.1 | PF01852.14 | START | 144 | 346 | 4.30E-49 |
| Glyur000338s00015568.1 | PF08670.6 | MEKHLA | 667 | 816 | 3.80E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.272 |
| SRR1783600 | control | 3.475 |
| SRR1783602 | moderate drought stress | 3.019 |
| SRR1811619 | moderate drought stress | 3.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.965 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.735 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.563 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.550 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.906 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.165 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 46.165 |
| SRR2868004 | Drought Stress(Tissue:root) | 43.783 |
| SRR2967015 | Control (Tissue:root) | 44.717 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.035 |
| SRR9715740 | Leave | 3.202 |
| SRR9715741 | Leave | 1.641 |
| SRR9715739 | Root | 8.128 |
| SRR9715742 | Root | 17.959 |
| SRR9715743 | Root | 15.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.204 |
| SRR8749028 | MeJA induced 9h | 0.034 |
| SRR8749029 | MeJA induced 9h | 0.201 |
| SRR8749030 | Uninduced | 0.048 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 31.632 |
| SRR8400027 | Control-Root | 43.686 |