Gene detail information of Glyur000338s00015572.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G05390.14.00E-152root FNR 1
NRXP_004486455.10PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Cicer arietinum]
COGYP_001016957.12.00E-71ferredoxin-NADP oxidoreductase (FNR) [Prochlorococcus marinus str. MIT 9303]
Swissprottr|Q41014|FENR2_PEA0Ferredoxin--NADP reductase, root isozyme, chloroplastic (Precursor)
trEMBLtr|V7BNA6|V7BNA6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW19479.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00338111175114152+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02641petH EC:1.18.1.2 Photosynthesis map00195


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000338s00015572.1PF00175.16NAD_binding_12003033.30E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.313
SRR1783600control30.035
SRR1783602moderate drought stress32.538
SRR1811619moderate drought stress32.366

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.354
DRR006520Root Summer glycyrrhizin high producing strain36.535
DRR006521Root Winter glycyrrhizin high producing strain43.745
DRR006522Root Winter glycyrrhizin high producing strain42.314
DRR006523Root Summer glycyrrhizin low producing strain57.165
DRR006524Root Summer glycyrrhizin low producing strain56.388
DRR006525Leaf Summer glycyrrhizin high producing strain23.938
DRR006526Leaf Summer glycyrrhizin high producing strain23.374

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)131.431
SRR2868004Drought Stress(Tissue:root)112.954
SRR2967015Control (Tissue:root)133.791

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.239
SRR9715740Leave36.233
SRR9715741Leave44.533
SRR9715739Root28.529
SRR9715742Root47.879
SRR9715743Root48.877

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h138.519
SRR8749028MeJA induced 9h224.318
SRR8749029MeJA induced 9h121.976
SRR8749030Uninduced189.633
SRR8749031Uninduced178.942
SRR8749032Uninduced140.929

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.805
SRR8400027Control-Root81.432

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved