Gene detail information of Glyur000338s00015581.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G20940.10Leucine-rich receptor-like protein kinase family protein
NRXP_004486464.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940-like isoform X1 [Cicer arietinum]
COGYP_004775215.15.00E-28RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGQ9|Y4294_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g20940
trEMBLtr|A0A072V606|A0A072V606_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH37061.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00338159948164302+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000338s00015581.1PF08263.7LRRNT_223681.80E-08
Glyur000338s00015581.1PF13855.1LRR_81682272.60E-07
Glyur000338s00015581.1PF00560.28LRR_12953120.7
Glyur000338s00015581.1PF00560.28LRR_13183380.57
Glyur000338s00015581.1PF13855.1LRR_84094682.50E-09
Glyur000338s00015581.1PF13855.1LRR_85055659.20E-09
Glyur000338s00015581.1PF07714.12Pkinase_Tyr7879831.80E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.584
SRR1783600control7.615
SRR1783602moderate drought stress3.509
SRR1811619moderate drought stress3.392

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.564
DRR006520Root Summer glycyrrhizin high producing strain12.460
DRR006521Root Winter glycyrrhizin high producing strain0.031
DRR006522Root Winter glycyrrhizin high producing strain0.030
DRR006523Root Summer glycyrrhizin low producing strain5.382
DRR006524Root Summer glycyrrhizin low producing strain5.391
DRR006525Leaf Summer glycyrrhizin high producing strain1.941
DRR006526Leaf Summer glycyrrhizin high producing strain1.927

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.251
SRR2868004Drought Stress(Tissue:root)5.065
SRR2967015Control (Tissue:root)6.569

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.001
SRR9715740Leave0.179
SRR9715741Leave0.643
SRR9715739Root5.848
SRR9715742Root3.941
SRR9715743Root4.202

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.834
SRR8749028MeJA induced 9h6.834
SRR8749029MeJA induced 9h4.813
SRR8749030Uninduced0.188
SRR8749031Uninduced0.011
SRR8749032Uninduced0.225

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.054
SRR8400027Control-Root10.113

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved