Gene detail information of Glyur000339s00020798.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11590.13.00E-30Integrase-type DNA-binding superfamily protein
NRXP_003533400.16.39E-81PREDICTED: ethylene-responsive transcription factor ERF036-like [Glycine max]
Swissprottr|Q9LYD3|DREB3_ARATH1.00E-56Dehydration-responsive element-binding protein 3
trEMBLtr|K7LEV4|K7LEV4_SOYBN2.00E-81Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32730.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003392072121413-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000339s00020798.1PF00847.15AP2571071.90E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.012
SRR1783600control6.156
SRR1783602moderate drought stress15.253
SRR1811619moderate drought stress15.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.519
DRR006520Root Summer glycyrrhizin high producing strain35.099
DRR006521Root Winter glycyrrhizin high producing strain0.161
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain64.491
DRR006524Root Summer glycyrrhizin low producing strain66.834
DRR006525Leaf Summer glycyrrhizin high producing strain2.321
DRR006526Leaf Summer glycyrrhizin high producing strain2.441

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.978
SRR2868004Drought Stress(Tissue:root)9.614
SRR2967015Control (Tissue:root)23.944

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.861
SRR9715740Leave2.271
SRR9715741Leave0.647
SRR9715739Root55.715
SRR9715742Root77.693
SRR9715743Root71.682

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.077
SRR8749028MeJA induced 9h2.307
SRR8749029MeJA induced 9h0.753
SRR8749030Uninduced0.623
SRR8749031Uninduced0.266
SRR8749032Uninduced0.403

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.452
SRR8400027Control-Root45.962

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved