Gene detail information of Glyur000339s00020807.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67280.1 | 8.00E-95 | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein |
| NR | XP_003533396.1 | 4.92E-158 | PREDICTED: probable lactoylglutathione lyase, chloroplast-like [Glycine max] |
| COG | NP_518641.1 | 3.00E-31 | lactoylglutathione lyase [Ralstonia solanacearum GMI1000] |
| Swissprot | tr|Q8W593|LGUC_ARATH | 3.00E-120 | Probable lactoylglutathione lyase, chloroplast (Precursor) |
| trEMBL | tr|I1L4L5|I1L4L5_SOYBN | 2.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00339 | 78819 | 83077 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01759 | GLO1, gloA | EC:4.4.1.5 | Pyruvate metabolism | map00620 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000339s00020807.1 | PF00903.20 | Glyoxalase | 160 | 236 | 5.80E-09 |
| Glyur000339s00020807.1 | PF00903.20 | Glyoxalase | 247 | 385 | 2.20E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.382 |
| SRR1783600 | control | 7.521 |
| SRR1783602 | moderate drought stress | 5.587 |
| SRR1811619 | moderate drought stress | 5.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.876 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.606 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.022 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.075 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.141 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.927 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 17.705 |
| SRR2868004 | Drought Stress(Tissue:root) | 20.945 |
| SRR2967015 | Control (Tissue:root) | 15.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.271 |
| SRR9715740 | Leave | 16.252 |
| SRR9715741 | Leave | 13.646 |
| SRR9715739 | Root | 4.697 |
| SRR9715742 | Root | 6.141 |
| SRR9715743 | Root | 6.776 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.354 |
| SRR8749028 | MeJA induced 9h | 9.348 |
| SRR8749029 | MeJA induced 9h | 9.185 |
| SRR8749030 | Uninduced | 10.624 |
| SRR8749031 | Uninduced | 7.285 |
| SRR8749032 | Uninduced | 4.141 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 15.312 |
| SRR8400027 | Control-Root | 15.549 |