Gene detail information of Glyur000341s00020138.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17785.1 | 8.00E-71 | myb domain protein 39 |
| NR | XP_003533439.1 | 1.52E-168 | PREDICTED: transcription factor MYB39-like isoform X1 [Glycine max] |
| Swissprot | tr|Q8GWP0|MYB39_ARATH | 2.00E-89 | Transcription factor MYB39 |
| trEMBL | tr|I1L4Y6|I1L4Y6_SOYBN | 6.00E-169 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G33870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00341 | 68622 | 70437 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000341s00020138.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 8.80E-18 |
| Glyur000341s00020138.1 | PF00249.26 | Myb_DNA-binding | 67 | 111 | 4.10E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.067 |
| SRR1783600 | control | 0.067 |
| SRR1783602 | moderate drought stress | 0.070 |
| SRR1811619 | moderate drought stress | 0.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.085 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.485 |
| SRR2868004 | Drought Stress(Tissue:root) | 10.455 |
| SRR2967015 | Control (Tissue:root) | 20.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.233 |
| SRR9715740 | Leave | 0.058 |
| SRR9715741 | Leave | 0.076 |
| SRR9715739 | Root | 0.046 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.661 |
| SRR8749028 | MeJA induced 9h | 22.509 |
| SRR8749029 | MeJA induced 9h | 8.313 |
| SRR8749030 | Uninduced | 57.662 |
| SRR8749031 | Uninduced | 49.128 |
| SRR8749032 | Uninduced | 12.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.011 |
| SRR8400027 | Control-Root | 0.846 |