Gene detail information of Glyur000341s00020140.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18230.17.00E-44
NRACU18153.13.25E-106unknown [Glycine max]
COGNP_926658.11.00E-09glucosyltransferase EpsE-like protein [Gloeobacter violaceus PCC 7421]
trEMBLtr|C6T8K1|C6T8K1_SOYBN1.00E-106Putative uncharacterized protein {ECO:0000313|EMBL:ACU18153.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003419550199181-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT1,GT1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07441ALG14 EC:2.4.1.141 N-Glycan biosynthesis map00510
Various types of N-glycan biosynthesismap00513


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000341s00020140.1PF08660.6Alg14541085.70E-13
Glyur000341s00020140.1PF08660.6Alg141151911.30E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.516
SRR1783600control4.496
SRR1783602moderate drought stress6.043
SRR1811619moderate drought stress5.959

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.623
DRR006520Root Summer glycyrrhizin high producing strain11.189
DRR006521Root Winter glycyrrhizin high producing strain12.578
DRR006522Root Winter glycyrrhizin high producing strain12.381
DRR006523Root Summer glycyrrhizin low producing strain8.009
DRR006524Root Summer glycyrrhizin low producing strain7.480
DRR006525Leaf Summer glycyrrhizin high producing strain5.689
DRR006526Leaf Summer glycyrrhizin high producing strain5.233

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.802
SRR2868004Drought Stress(Tissue:root)14.405
SRR2967015Control (Tissue:root)13.635

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.829
SRR9715740Leave8.441
SRR9715741Leave8.377
SRR9715739Root3.178
SRR9715742Root6.614
SRR9715743Root7.059

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.132
SRR8749028MeJA induced 9h5.277
SRR8749029MeJA induced 9h6.220
SRR8749030Uninduced3.732
SRR8749031Uninduced3.419
SRR8749032Uninduced3.216

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.105
SRR8400027Control-Root19.562

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved