Gene detail information of Glyur000343s00025694.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G53450.10OBP3-responsive gene 1
NRXP_004502637.10PREDICTED: uncharacterized protein LOC101506759 [Cicer arietinum]
Swissprottr|Q9LV04|PAP14_ARATH0Probable plastid-lipid-associated protein 14, chloroplastic (Precursor)
trEMBLtr|G7J6U8|G7J6U8_MEDTR0OBP3-responsive protein {ECO:0000313|EMBL:AES72480.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003436425968583-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.4.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000343s00025694.1PF00069.20Pkinase2384058.20E-05
Glyur000343s00025694.1PF04755.7PAP_fibrillin4416674.20E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.673
SRR1783600control11.570
SRR1783602moderate drought stress13.856
SRR1811619moderate drought stress14.000

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.483
DRR006520Root Summer glycyrrhizin high producing strain29.222
DRR006521Root Winter glycyrrhizin high producing strain31.470
DRR006522Root Winter glycyrrhizin high producing strain30.969
DRR006523Root Summer glycyrrhizin low producing strain22.419
DRR006524Root Summer glycyrrhizin low producing strain22.854
DRR006525Leaf Summer glycyrrhizin high producing strain40.273
DRR006526Leaf Summer glycyrrhizin high producing strain40.090

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.500
SRR2868004Drought Stress(Tissue:root)30.926
SRR2967015Control (Tissue:root)48.291

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave59.526
SRR9715740Leave53.298
SRR9715741Leave82.589
SRR9715739Root19.218
SRR9715742Root48.716
SRR9715743Root43.938

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.639
SRR8749028MeJA induced 9h72.434
SRR8749029MeJA induced 9h67.663
SRR8749030Uninduced59.175
SRR8749031Uninduced87.291
SRR8749032Uninduced83.101

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.698
SRR8400027Control-Root16.978

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved