Gene detail information of Glyur000344s00030062.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32010.1 | 9.00E-127 | HSI2-like 1 |
| NR | KHN43730.1 | 0 | B3 domain-containing protein [Glycine soja] |
| Swissprot | tr|Q6Z3U3|Y7797_ORYSJ | 3.00E-166 | B3 domain-containing protein Os07g0679700 |
| trEMBL | tr|K7KCN0|K7KCN0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G04330.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00344 | 29825 | 37983 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000344s00030062.1 | PF07496.10 | zf-CW | 223 | 266 | 4.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.289 |
| SRR1783600 | control | 6.352 |
| SRR1783602 | moderate drought stress | 5.153 |
| SRR1811619 | moderate drought stress | 5.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.550 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.478 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.126 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.962 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.218 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.387 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.376 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 21.774 |
| SRR2868004 | Drought Stress(Tissue:root) | 29.895 |
| SRR2967015 | Control (Tissue:root) | 32.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 3.337 |
| SRR9715740 | Leave | 4.296 |
| SRR9715741 | Leave | 6.705 |
| SRR9715739 | Root | 3.317 |
| SRR9715742 | Root | 9.845 |
| SRR9715743 | Root | 8.981 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 28.510 |
| SRR8749028 | MeJA induced 9h | 29.355 |
| SRR8749029 | MeJA induced 9h | 33.669 |
| SRR8749030 | Uninduced | 35.998 |
| SRR8749031 | Uninduced | 83.176 |
| SRR8749032 | Uninduced | 45.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.708 |
| SRR8400027 | Control-Root | 13.622 |