Gene detail information of Glyur000345s00015648.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44940.1 | 4.00E-31 | Integrase-type DNA-binding superfamily protein |
| NR | XP_004508937.1 | 1.19E-64 | PREDICTED: ethylene-responsive transcription factor ERF034-like [Cicer arietinum] |
| Swissprot | tr|Q8LBQ7|ERF34_ARATH | 3.00E-51 | Ethylene-responsive transcription factor ERF034 |
| trEMBL | tr|G7JHR1|G7JHR1_MEDTR | 3.00E-64 | Ethylene response factor {ECO:0000313|EMBL:AES90882.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00345 | 27691 | 28317 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000345s00015648.1 | PF00847.15 | AP2 | 43 | 92 | 7.50E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.235 |
| SRR1783600 | control | 1.186 |
| SRR1783602 | moderate drought stress | 1.026 |
| SRR1811619 | moderate drought stress | 0.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.519 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.614 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.138 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.452 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.751 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.938 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.387 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.689 |
| SRR2967015 | Control (Tissue:root) | 6.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.938 |
| SRR9715740 | Leave | 0.315 |
| SRR9715741 | Leave | 0.619 |
| SRR9715739 | Root | 0.951 |
| SRR9715742 | Root | 3.658 |
| SRR9715743 | Root | 2.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.546 |
| SRR8749028 | MeJA induced 9h | 0.214 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.182 |
| SRR8400027 | Control-Root | 1.401 |