Gene detail information of Glyur000346s00018170.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G19110.10Protein kinase superfamily protein
NRXP_006599209.10PREDICTED: cyclin-dependent kinase F-4-like [Glycine max]
COGYP_003112167.15.00E-30serine/threonine protein kinase [Catenulispora acidiphila DSM 44928]
Swissprottr|Q6Z8C8|CDKF4_ORYSJ0Cyclin-dependent kinase F-4
trEMBLtr|I1MMJ8|I1MMJ8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G17580.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00346867617012-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000346s00018170.2PF00069.20Pkinase863652.70E-75


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control39.911
SRR1783600control40.152
SRR1783602moderate drought stress40.388
SRR1811619moderate drought stress40.302

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain35.879
DRR006520Root Summer glycyrrhizin high producing strain35.027
DRR006521Root Winter glycyrrhizin high producing strain48.047
DRR006522Root Winter glycyrrhizin high producing strain44.304
DRR006523Root Summer glycyrrhizin low producing strain30.947
DRR006524Root Summer glycyrrhizin low producing strain31.266
DRR006525Leaf Summer glycyrrhizin high producing strain15.675
DRR006526Leaf Summer glycyrrhizin high producing strain15.907

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.435
SRR2868004Drought Stress(Tissue:root)48.787
SRR2967015Control (Tissue:root)48.669

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.998
SRR9715740Leave35.372
SRR9715741Leave21.055
SRR9715739Root8.586
SRR9715742Root17.559
SRR9715743Root17.883

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.441
SRR8749028MeJA induced 9h34.595
SRR8749029MeJA induced 9h22.711
SRR8749030Uninduced33.967
SRR8749031Uninduced20.144
SRR8749032Uninduced20.528

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.015
SRR8400027Control-Root53.775

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved