Gene detail information of Glyur000347s00029036.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24310.1 | 3.00E-65 | myb domain protein 305 |
| NR | AES60432.2 | 6.94E-132 | myb transcription factor [Medicago truncatula] |
| Swissprot | tr|P81391|MYB05_ANTMA | 2.00E-52 | Myb-related protein 305 |
| trEMBL | tr|G7I6P8|G7I6P8_MEDTR | 3.00E-132 | Myb transcription factor {ECO:0000313|EMBL:AES60432.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00347 | 27519 | 28829 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000347s00029036.1 | PF00249.26 | Myb_DNA-binding | 21 | 68 | 7.10E-17 |
| Glyur000347s00029036.1 | PF00249.26 | Myb_DNA-binding | 74 | 118 | 3.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.712 |
| SRR1783600 | control | 0.716 |
| SRR1783602 | moderate drought stress | 0.324 |
| SRR1811619 | moderate drought stress | 0.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.263 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.261 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.271 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.264 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.538 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.536 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.478 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.531 |
| SRR2967015 | Control (Tissue:root) | 14.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.022 |
| SRR9715742 | Root | 0.309 |
| SRR9715743 | Root | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.647 |
| SRR8400027 | Control-Root | 0.163 |