Gene detail information of Glyur000347s00029056.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G74260.10purine biosynthesis 4
NRXP_004503568.10PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial-like [Cicer arietinum]
COGYP_002248472.10phosphoribosylformylglycinamidine synthase [Thermodesulfovibrio yellowstonii DSM 11347]
Swissprottr|Q9M8D3|PUR4_ARATH0Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|A0A072TUU6|A0A072TUU6_MEDTR0Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KEH21294.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00347170697179557+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01952purL, PFAS EC:6.3.5.3 Purine metabolism map00230


Gene Ontology

biological_process

GO:0006189  'de novo' IMP biosynthetic process


molecular_function

GO:0003824  catalytic activity

GO:0004642  phosphoribosylformylglycinamidine synthase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000347s00029056.1PF00586.19AIRS3264512.90E-14
Glyur000347s00029056.1PF02769.17AIRS_C4936461.10E-17
Glyur000347s00029056.1PF02769.17AIRS_C87810179.70E-20
Glyur000347s00029056.1PF13507.1GATase_5108613532.60E-100


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.443
SRR1783600control9.717
SRR1783602moderate drought stress17.097
SRR1811619moderate drought stress16.931

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.831
DRR006520Root Summer glycyrrhizin high producing strain7.815
DRR006521Root Winter glycyrrhizin high producing strain6.413
DRR006522Root Winter glycyrrhizin high producing strain6.304
DRR006523Root Summer glycyrrhizin low producing strain12.531
DRR006524Root Summer glycyrrhizin low producing strain12.298
DRR006525Leaf Summer glycyrrhizin high producing strain4.696
DRR006526Leaf Summer glycyrrhizin high producing strain4.829

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.591
SRR2868004Drought Stress(Tissue:root)16.166
SRR2967015Control (Tissue:root)18.424

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.402
SRR9715740Leave11.535
SRR9715741Leave10.580
SRR9715739Root5.794
SRR9715742Root17.673
SRR9715743Root15.730

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.693
SRR8749028MeJA induced 9h7.922
SRR8749029MeJA induced 9h5.106
SRR8749030Uninduced3.955
SRR8749031Uninduced3.095
SRR8749032Uninduced3.007

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.675
SRR8400027Control-Root18.605

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved