Gene detail information of Glyur000348s00020042.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27490.2 | 4.00E-09 | dephospho-CoA kinase family |
| NR | XP_006364955.1 | 1.07E-11 | PREDICTED: dephospho-CoA kinase domain-containing protein-like isoform X1 [Solanum tuberosum] |
| COG | YP_002560758.1 | 6.00E-07 | dephospho-CoA kinase [Macrococcus caseolyticus JCSC5402] |
| Swissprot | tr|Q9ZQH0|COAE_ARATH | 1.00E-10 | Dephospho-CoA kinase |
| trEMBL | tr|M1CNS0|M1CNS0_SOLTU | 4.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400071426} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00348 | 120803 | 125172 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00859 | coaE | EC:2.7.1.24 | Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000348s00020042.1 | PF01121.15 | CoaE | 3 | 39 | 4.60E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.145 |
| SRR1783600 | control | 0.290 |
| SRR1783602 | moderate drought stress | 1.837 |
| SRR1811619 | moderate drought stress | 2.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.068 |
| SRR9715740 | Leave | 0.065 |
| SRR9715741 | Leave | 0.067 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.063 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.071 |
| SRR8400027 | Control-Root | 0.056 |