Gene detail information of Glyur000349s00021092.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G47570.10Leucine-rich repeat protein kinase family protein
NRXP_004512441.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Cicer arietinum]
COGYP_001192956.12.00E-48two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|C0LGP4|Y3475_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|G7JB64|G7JB64_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES71116.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0034918985123-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000349s00021092.1PF08263.7LRRNT_247864.00E-11
Glyur000349s00021092.1PF00560.28LRR_11872090.97
Glyur000349s00021092.1PF13516.1LRR_62823001.6
Glyur000349s00021092.1PF00560.28LRR_14825030.0077
Glyur000349s00021092.1PF12799.2LRR_45305668.90E-07
Glyur000349s00021092.1PF00560.28LRR_15805980.059
Glyur000349s00021092.1PF00069.20Pkinase7239461.00E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.253
SRR1783600control0.244
SRR1783602moderate drought stress0.367
SRR1811619moderate drought stress0.387

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.204
DRR006520Root Summer glycyrrhizin high producing strain0.247
DRR006521Root Winter glycyrrhizin high producing strain0.502
DRR006522Root Winter glycyrrhizin high producing strain0.485
DRR006523Root Summer glycyrrhizin low producing strain0.356
DRR006524Root Summer glycyrrhizin low producing strain0.300
DRR006525Leaf Summer glycyrrhizin high producing strain0.075
DRR006526Leaf Summer glycyrrhizin high producing strain0.190

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.184
SRR2868004Drought Stress(Tissue:root)1.419
SRR2967015Control (Tissue:root)1.163

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.011
SRR9715740Leave0.197
SRR9715741Leave0.011
SRR9715739Root0.024
SRR9715742Root0.010
SRR9715743Root0.002

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.224
SRR8749028MeJA induced 9h1.171
SRR8749029MeJA induced 9h0.128
SRR8749030Uninduced0.951
SRR8749031Uninduced9.180
SRR8749032Uninduced4.785

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.026
SRR8400027Control-Root0.063

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved