Gene detail information of Glyur000350s00020051.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24503.10aldehyde dehydrogenase 2C4
NRXP_007152818.10hypothetical protein PHAVU_004G162300g [Phaseolus vulgaris]
COGYP_722268.11.00E-156aldehyde dehydrogenase [Trichodesmium erythraeum IMS101]
Swissprottr|Q56YU0|AL2C4_ARATH0Aldehyde dehydrogenase family 2 member C4
trEMBLtr|V7C3S3|V7C3S3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW24812.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00350633110179+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12355REF1 EC:1.2.1.68 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000350s00020051.1PF00171.17Aldedh334403.00E-156


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.052
SRR1783600control2.038
SRR1783602moderate drought stress3.157
SRR1811619moderate drought stress2.956

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.076
DRR006520Root Summer glycyrrhizin high producing strain1.753
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.153
DRR006524Root Summer glycyrrhizin low producing strain0.152
DRR006525Leaf Summer glycyrrhizin high producing strain2.859
DRR006526Leaf Summer glycyrrhizin high producing strain2.772

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.796
SRR2868004Drought Stress(Tissue:root)8.191
SRR2967015Control (Tissue:root)4.918

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.079
SRR9715740Leave6.858
SRR9715741Leave10.729
SRR9715739Root0.639
SRR9715742Root4.706
SRR9715743Root3.333

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.593
SRR8749028MeJA induced 9h6.247
SRR8749029MeJA induced 9h3.090
SRR8749030Uninduced70.404
SRR8749031Uninduced49.180
SRR8749032Uninduced20.888

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.047
SRR8400027Control-Root31.763

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved