Gene detail information of Glyur000350s00020077.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G13250.10NAD(P)-binding Rossmann-fold superfamily protein
NRXP_003534200.10PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max]
COGYP_002015829.15.00E-40short-chain dehydrogenase/reductase SDR [Prosthecochloris aestuarii DSM 271]
Swissprottr|Q5N800|NYC1_ORYSJ0Probable chlorophyll(ide) b reductase NYC1, chloroplastic (Precursor)
trEMBLtr|I1L4I7|I1L4I7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00350144421149284+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13606NOL, NYC1 EC:1.1.1.294 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000350s00020077.2PF00106.20adh_short1833504.20E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.238
SRR1783600control8.364
SRR1783602moderate drought stress8.932
SRR1811619moderate drought stress8.762

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain38.673
DRR006520Root Summer glycyrrhizin high producing strain37.937
DRR006521Root Winter glycyrrhizin high producing strain21.863
DRR006522Root Winter glycyrrhizin high producing strain21.220
DRR006523Root Summer glycyrrhizin low producing strain67.349
DRR006524Root Summer glycyrrhizin low producing strain66.589
DRR006525Leaf Summer glycyrrhizin high producing strain147.113
DRR006526Leaf Summer glycyrrhizin high producing strain146.640

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.152
SRR2868004Drought Stress(Tissue:root)33.010
SRR2967015Control (Tissue:root)41.422

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave89.067
SRR9715740Leave148.678
SRR9715741Leave97.176
SRR9715739Root8.586
SRR9715742Root24.340
SRR9715743Root22.685

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.513
SRR8749028MeJA induced 9h16.897
SRR8749029MeJA induced 9h11.152
SRR8749030Uninduced6.923
SRR8749031Uninduced4.068
SRR8749032Uninduced5.373

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.604
SRR8400027Control-Root25.546

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved