Gene detail information of Glyur000350s00020078.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24550.16.00E-180proline extensin-like receptor kinase 1
NRXP_006586722.10PREDICTED: putative receptor protein kinase PERK1 isoform X1 [Glycine max]
COGYP_001958461.13.00E-24hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9LV48|PERK1_ARATH0Proline-rich receptor-like protein kinase PERK1
trEMBLtr|I1L4I8|I1L4I8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G32390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00350164910169499+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000350s00020078.1PF07714.12Pkinase_Tyr3045714.00E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control59.058
SRR1783600control59.467
SRR1783602moderate drought stress52.522
SRR1811619moderate drought stress52.855

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain80.375
DRR006520Root Summer glycyrrhizin high producing strain79.859
DRR006521Root Winter glycyrrhizin high producing strain9.487
DRR006522Root Winter glycyrrhizin high producing strain8.932
DRR006523Root Summer glycyrrhizin low producing strain81.859
DRR006524Root Summer glycyrrhizin low producing strain82.088
DRR006525Leaf Summer glycyrrhizin high producing strain45.495
DRR006526Leaf Summer glycyrrhizin high producing strain45.318

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)60.024
SRR2868004Drought Stress(Tissue:root)47.422
SRR2967015Control (Tissue:root)46.319

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.972
SRR9715740Leave52.937
SRR9715741Leave74.458
SRR9715739Root52.499
SRR9715742Root182.929
SRR9715743Root147.724

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h131.229
SRR8749028MeJA induced 9h106.877
SRR8749029MeJA induced 9h147.634
SRR8749030Uninduced145.735
SRR8749031Uninduced90.478
SRR8749032Uninduced95.559

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.193
SRR8400027Control-Root66.055

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved