Gene detail information of Glyur000350s00020079.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G19660.10SITE-1 protease
NRXP_004513000.10PREDICTED: membrane-bound transcription factor site-1 protease-like [Cicer arietinum]
COGYP_003382944.18.00E-33peptidase S8/S53 subtilisin kexin sedolisin [Kribbella flavida DSM 17836]
Swissprottr|Q9LNU1|CRSP_ARATH3.00E-06CO(2)-response secreted protease {ECO:0000303|PubMed:25043023} (Precursor)
trEMBLtr|V7C6B5|V7C6B5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW24835.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00350173030179061-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08653MBTPS1 EC:3.4.21.112 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0006508  proteolysis


molecular_function

GO:0004252  serine-type endopeptidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000350s00020079.2PF00082.17Peptidase_S82054652.20E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.172
SRR1783600control7.310
SRR1783602moderate drought stress11.466
SRR1811619moderate drought stress11.487

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.329
DRR006520Root Summer glycyrrhizin high producing strain6.154
DRR006521Root Winter glycyrrhizin high producing strain28.305
DRR006522Root Winter glycyrrhizin high producing strain27.498
DRR006523Root Summer glycyrrhizin low producing strain7.011
DRR006524Root Summer glycyrrhizin low producing strain7.282
DRR006525Leaf Summer glycyrrhizin high producing strain6.431
DRR006526Leaf Summer glycyrrhizin high producing strain6.490

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.522
SRR2868004Drought Stress(Tissue:root)19.491
SRR2967015Control (Tissue:root)20.945

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave7.173
SRR9715740Leave9.652
SRR9715741Leave9.190
SRR9715739Root4.916
SRR9715742Root11.858
SRR9715743Root10.368

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.001
SRR8749028MeJA induced 9h16.149
SRR8749029MeJA induced 9h9.914
SRR8749030Uninduced8.322
SRR8749031Uninduced7.348
SRR8749032Uninduced9.205

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.267
SRR8400027Control-Root13.895

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved