Gene detail information of Glyur000352s00022300.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23740.20nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding
NRXP_003548905.10PREDICTED: histone-lysine N-methyltransferase SUVR5-like isoform X1 [Glycine max]
COGYP_003280830.18.00E-13nuclear protein SET [Comamonas testosteroni CNB-2]
Swissprottr|O64827|SUVR5_ARATH0Histone-lysine N-methyltransferase SUVR5
trEMBLtr|K7MHC3|K7MHC3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G25795.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00352102661110228+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0034968  histone lysine methylation


cellular_component

GO:0005634  nucleus


molecular_function

GO:0005515  protein binding

GO:0008270  zinc ion binding

GO:0018024  histone-lysine N-methyltransferase activity

GO:0046872  metal ion binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000352s00022300.1PF05033.11Pre-SET121113431.50E-14
Glyur000352s00022300.1PF00856.23SET136214831.70E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.667
SRR1783600control1.714
SRR1783602moderate drought stress2.739
SRR1811619moderate drought stress2.679

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.358
DRR006520Root Summer glycyrrhizin high producing strain1.313
DRR006521Root Winter glycyrrhizin high producing strain1.018
DRR006522Root Winter glycyrrhizin high producing strain0.995
DRR006523Root Summer glycyrrhizin low producing strain2.443
DRR006524Root Summer glycyrrhizin low producing strain2.470
DRR006525Leaf Summer glycyrrhizin high producing strain0.543
DRR006526Leaf Summer glycyrrhizin high producing strain0.571

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.613
SRR2868004Drought Stress(Tissue:root)3.208
SRR2967015Control (Tissue:root)2.641

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.542
SRR9715740Leave1.489
SRR9715741Leave3.031
SRR9715739Root0.526
SRR9715742Root2.400
SRR9715743Root2.477

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.471
SRR8749028MeJA induced 9h4.387
SRR8749029MeJA induced 9h5.418
SRR8749030Uninduced3.019
SRR8749031Uninduced5.113
SRR8749032Uninduced4.208

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.468
SRR8400027Control-Root1.974

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved