Gene detail information of Glyur000353s00015524.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G18660.20plant glycogenin-like starch initiation protein 1
NRXP_006581757.10PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1-like [Glycine max]
COGYP_769553.13.00E-21glycosyl transferase (sulfolipid biosynthesis) protein [Rhizobium leguminosarum bv. viciae 3841]
Swissprottr|Q9LSB1|GUX1_ARATH0UDP-glucuronate:xylan alpha-glucuronosyltransferase 1
trEMBLtr|K7KV68|K7KV68_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G15690.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0035310473391+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0009834  plant-type secondary cell wall biogenesis

GO:0045492  xylan biosynthetic process


cellular_component

GO:0005794  Golgi apparatus


molecular_function

GO:0015020  glucuronosyltransferase activity

GO:0016757  transferase activity, transferring glycosyl groups

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000353s00015524.1PF01501.15Glyco_transf_82874962.80E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.733
SRR1783600control2.804
SRR1783602moderate drought stress1.419
SRR1811619moderate drought stress1.462

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.112
DRR006520Root Summer glycyrrhizin high producing strain3.014
DRR006521Root Winter glycyrrhizin high producing strain0.444
DRR006522Root Winter glycyrrhizin high producing strain0.419
DRR006523Root Summer glycyrrhizin low producing strain2.859
DRR006524Root Summer glycyrrhizin low producing strain2.942
DRR006525Leaf Summer glycyrrhizin high producing strain1.403
DRR006526Leaf Summer glycyrrhizin high producing strain1.442

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.017
SRR2868004Drought Stress(Tissue:root)2.840
SRR2967015Control (Tissue:root)2.065

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.463
SRR9715740Leave0.440
SRR9715741Leave0.210
SRR9715739Root0.160
SRR9715742Root2.959
SRR9715743Root1.790

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.359
SRR8749028MeJA induced 9h0.173
SRR8749029MeJA induced 9h0.165
SRR8749030Uninduced0.069
SRR8749031Uninduced0.062
SRR8749032Uninduced0.085

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.585
SRR8400027Control-Root6.263

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved