Gene detail information of Glyur000353s00015530.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77120.10alcohol dehydrogenase 1
NRXP_003523232.10PREDICTED: alcohol dehydrogenase-like [Glycine max]
COGYP_003147226.14.00E-147S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [Kangiella koreensis DSM 16069]
Swissprottr|P48977|ADH_MALDO0Alcohol dehydrogenase
trEMBLtr|I1JY29|I1JY29_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G39190.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003532774430638-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K18857ADH1 EC:1.1.1.1 Glycolysis / Gluconeogenesis map00010
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592
Tyrosine metabolismmap00350


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008270  zinc ion binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000353s00015530.1PF08240.7ADH_N371631.50E-24
Glyur000353s00015530.1PF00107.21ADH_zinc_N2073359.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.854
SRR1783600control1.954
SRR1783602moderate drought stress0.799
SRR1811619moderate drought stress0.801

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.087
DRR006520Root Summer glycyrrhizin high producing strain0.158
DRR006521Root Winter glycyrrhizin high producing strain1.305
DRR006522Root Winter glycyrrhizin high producing strain1.338
DRR006523Root Summer glycyrrhizin low producing strain1.309
DRR006524Root Summer glycyrrhizin low producing strain1.429
DRR006525Leaf Summer glycyrrhizin high producing strain0.899
DRR006526Leaf Summer glycyrrhizin high producing strain0.820

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.324
SRR2868004Drought Stress(Tissue:root)27.233
SRR2967015Control (Tissue:root)32.939

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.893
SRR9715740Leave1.355
SRR9715741Leave0.931
SRR9715739Root0.522
SRR9715742Root0.891
SRR9715743Root0.765

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.352
SRR8749028MeJA induced 9h134.697
SRR8749029MeJA induced 9h76.650
SRR8749030Uninduced3.093
SRR8749031Uninduced14.393
SRR8749032Uninduced12.158

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root48.661
SRR8400027Control-Root17.272

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved