Gene detail information of Glyur000353s00015532.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64600.1 | 0 | O-fucosyltransferase family protein |
| NR | AES72844.2 | 0 | O-fucosyltransferase family protein [Medicago truncatula] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 2.00E-85 | Uncharacterized protein At1g04910 |
| trEMBL | tr|G7JBI4|G7JBI4_MEDTR | 0 | O-fucosyltransferase family protein {ECO:0000313|EMBL:AES72844.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00353 | 39862 | 45167 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000353s00015532.1 | PF10250.4 | O-FucT | 111 | 427 | 8.70E-89 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.335 |
| SRR1783600 | control | 17.375 |
| SRR1783602 | moderate drought stress | 15.734 |
| SRR1811619 | moderate drought stress | 15.748 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.277 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.315 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.871 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.437 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.047 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.004 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.954 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.762 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.593 |
| SRR2967015 | Control (Tissue:root) | 16.961 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.237 |
| SRR9715740 | Leave | 9.392 |
| SRR9715741 | Leave | 9.594 |
| SRR9715739 | Root | 2.933 |
| SRR9715742 | Root | 5.026 |
| SRR9715743 | Root | 5.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.520 |
| SRR8749028 | MeJA induced 9h | 14.363 |
| SRR8749029 | MeJA induced 9h | 9.100 |
| SRR8749030 | Uninduced | 12.235 |
| SRR8749031 | Uninduced | 11.595 |
| SRR8749032 | Uninduced | 8.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 18.123 |
| SRR8400027 | Control-Root | 16.729 |