Gene detail information of Glyur000353s00015538.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G64060.11.00E-16NAC domain containing protein 103
NRXP_004502932.15.09E-61PREDICTED: NAC domain-containing protein 78-like isoform X2 [Cicer arietinum]
Swissprottr|Q9FIW5|NAC94_ARATH2.00E-17Putative NAC domain-containing protein 94
trEMBLtr|A0A072V177|A0A072V177_MEDTR4.00E-55NAC domain class transcription factor {ECO:0000313|EMBL:KEH35592.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00353103743107760+


Gene family

Gene familysubfamily
Transcription Factors FamilyNAC


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000353s00015538.2PF02365.10NAM6531.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control30.896
SRR1783600control31.153
SRR1783602moderate drought stress43.858
SRR1811619moderate drought stress43.739

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain30.675
DRR006520Root Summer glycyrrhizin high producing strain30.541
DRR006521Root Winter glycyrrhizin high producing strain34.929
DRR006522Root Winter glycyrrhizin high producing strain34.147
DRR006523Root Summer glycyrrhizin low producing strain28.280
DRR006524Root Summer glycyrrhizin low producing strain28.034
DRR006525Leaf Summer glycyrrhizin high producing strain13.065
DRR006526Leaf Summer glycyrrhizin high producing strain12.841

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.617
SRR2868004Drought Stress(Tissue:root)36.327
SRR2967015Control (Tissue:root)40.685

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.736
SRR9715740Leave12.880
SRR9715741Leave13.670
SRR9715739Root18.481
SRR9715742Root14.979
SRR9715743Root17.666

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h67.507
SRR8749028MeJA induced 9h69.850
SRR8749029MeJA induced 9h46.394
SRR8749030Uninduced20.327
SRR8749031Uninduced9.529
SRR8749032Uninduced18.432

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.492
SRR8400027Control-Root38.918

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved