Gene detail information of Glyur000353s00015541.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G13680.10callose synthase 5
NRAES72859.20glucan synthase-like protein [Medicago truncatula]
Swissprottr|Q3B724|CALS5_ARATH0Callose synthase 5
trEMBLtr|G7JBJ9|G7JBJ9_MEDTR0Glucan synthase-like protein {ECO:0000313|EMBL:AES72859.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00353118345133225-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT48


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006075  (1->3)-beta-D-glucan biosynthetic process

GO:0009058  biosynthetic process


cellular_component

GO:0000148  1,3-beta-D-glucan synthase complex

GO:0016020  membrane


molecular_function

GO:0003824  catalytic activity

GO:0003843  1,3-beta-D-glucan synthase activity

GO:0030170  pyridoxal phosphate binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000353s00015541.1PF14288.1FKS1_dom13995032.60E-29
Glyur000353s00015541.1PF02364.10Glucan_synthase115513795.50E-57
Glyur000353s00015541.1PF02364.10Glucan_synthase149316898.30E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.159
SRR1783600control2.113
SRR1783602moderate drought stress2.564
SRR1811619moderate drought stress2.633

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.609
DRR006520Root Summer glycyrrhizin high producing strain1.575
DRR006521Root Winter glycyrrhizin high producing strain1.487
DRR006522Root Winter glycyrrhizin high producing strain1.443
DRR006523Root Summer glycyrrhizin low producing strain1.149
DRR006524Root Summer glycyrrhizin low producing strain1.133
DRR006525Leaf Summer glycyrrhizin high producing strain1.864
DRR006526Leaf Summer glycyrrhizin high producing strain1.837

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.545
SRR2868004Drought Stress(Tissue:root)3.240
SRR2967015Control (Tissue:root)3.799

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.558
SRR9715740Leave0.838
SRR9715741Leave0.319
SRR9715739Root0.209
SRR9715742Root1.279
SRR9715743Root1.148

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.873
SRR8749028MeJA induced 9h1.137
SRR8749029MeJA induced 9h0.403
SRR8749030Uninduced0.632
SRR8749031Uninduced0.265
SRR8749032Uninduced0.216

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.791
SRR8400027Control-Root8.328

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved