Gene detail information of Glyur000353s00015543.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G53570.32.00E-175mitogen-activated protein kinase kinase kinase 3
NRXP_004502938.10PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Cicer arietinum]
COGYP_008153270.12.00E-28hypothetical protein SCE1572_34485 [Sorangium cellulosum So0157-2]
Swissprottr|Q9CAD5|YODA_ARATH1.00E-140Mitogen-activated protein kinase kinase kinase YODA
trEMBLtr|G7JBK2|G7JBK2_MEDTR0MAP kinase kinase kinase {ECO:0000313|EMBL:AES72862.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00353140502146189+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000353s00015543.1PF00069.20Pkinase2455011.70E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control52.924
SRR1783600control52.779
SRR1783602moderate drought stress51.491
SRR1811619moderate drought stress51.321

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.594
DRR006520Root Summer glycyrrhizin high producing strain57.009
DRR006521Root Winter glycyrrhizin high producing strain47.244
DRR006522Root Winter glycyrrhizin high producing strain46.417
DRR006523Root Summer glycyrrhizin low producing strain120.124
DRR006524Root Summer glycyrrhizin low producing strain120.486
DRR006525Leaf Summer glycyrrhizin high producing strain47.112
DRR006526Leaf Summer glycyrrhizin high producing strain46.890

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.405
SRR2868004Drought Stress(Tissue:root)74.132
SRR2967015Control (Tissue:root)65.328

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave72.498
SRR9715740Leave68.217
SRR9715741Leave96.704
SRR9715739Root63.325
SRR9715742Root122.826
SRR9715743Root104.285

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h61.973
SRR8749028MeJA induced 9h74.040
SRR8749029MeJA induced 9h75.803
SRR8749030Uninduced134.921
SRR8749031Uninduced103.859
SRR8749032Uninduced56.583

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root50.280
SRR8400027Control-Root66.250

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved