Gene detail information of Glyur000355s00013926.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G40042.13.00E-28Microsomal signal peptidase 12 kDa subunit (SPC12)
NRXP_004504450.16.28E-56PREDICTED: probable signal peptidase complex subunit 1-like [Cicer arietinum]
Swissprottr|Q944J0|SPCS1_ARATH1.00E-39Probable signal peptidase complex subunit 1
trEMBLtr|I1KS11|I1KS11_SOYBN9.00E-54Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G10900.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003552268924562+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K12946SPCS1 EC:3.4.-.- Protein export map03060


Gene Ontology

biological_process

GO:0006465  signal peptide processing


cellular_component

GO:0005787  signal peptidase complex

GO:0016021  integral component of membrane


molecular_function

GO:0008233  peptidase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000355s00013926.1PF06645.8SPC121733.50E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control90.859
SRR1783600control90.881
SRR1783602moderate drought stress77.797
SRR1811619moderate drought stress78.393

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain59.838
DRR006520Root Summer glycyrrhizin high producing strain59.217
DRR006521Root Winter glycyrrhizin high producing strain31.823
DRR006522Root Winter glycyrrhizin high producing strain30.663
DRR006523Root Summer glycyrrhizin low producing strain69.263
DRR006524Root Summer glycyrrhizin low producing strain68.742
DRR006525Leaf Summer glycyrrhizin high producing strain31.258
DRR006526Leaf Summer glycyrrhizin high producing strain31.673

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)98.712
SRR2868004Drought Stress(Tissue:root)80.687
SRR2967015Control (Tissue:root)76.061

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave74.751
SRR9715740Leave75.071
SRR9715741Leave81.466
SRR9715739Root74.126
SRR9715742Root54.956
SRR9715743Root49.818

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h189.784
SRR8749028MeJA induced 9h73.483
SRR8749029MeJA induced 9h143.597
SRR8749030Uninduced64.675
SRR8749031Uninduced55.361
SRR8749032Uninduced68.808

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root92.970
SRR8400027Control-Root93.428

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved