Gene detail information of Glyur000355s00013930.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67490.10glucosidase 1
NRKEH20582.10mannosyl-oligosaccharide glucosidase [Medicago truncatula]
COGYP_001540832.12.00E-09glycoside hydrolase [Caldivirga maquilingensis IC-167]
Swissprottr|F4HTM3|GCS1_ARATH0Mannosyl-oligosaccharide glucosidase GCS1
trEMBLtr|A0A072TT32|A0A072TT32_MEDTR0Mannosyl-oligosaccharide glucosidase {ECO:0000313|EMBL:KEH20582.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003553766046985-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH63


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01228GCS1 EC:3.2.1.106 N-Glycan biosynthesis map00510
Protein processing in endoplasmic reticulummap04141


Gene Ontology

biological_process

GO:0009311  oligosaccharide metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0004573  mannosyl-oligosaccharide glucosidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000355s00013930.1PF03200.11Glyco_hydro_63732661.80E-58
Glyur000355s00013930.1PF03200.11Glyco_hydro_632737985.90E-239


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.584
SRR1783600control23.502
SRR1783602moderate drought stress19.258
SRR1811619moderate drought stress19.094

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.320
DRR006520Root Summer glycyrrhizin high producing strain28.529
DRR006521Root Winter glycyrrhizin high producing strain31.472
DRR006522Root Winter glycyrrhizin high producing strain30.769
DRR006523Root Summer glycyrrhizin low producing strain17.454
DRR006524Root Summer glycyrrhizin low producing strain17.632
DRR006525Leaf Summer glycyrrhizin high producing strain34.308
DRR006526Leaf Summer glycyrrhizin high producing strain33.976

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.266
SRR2868004Drought Stress(Tissue:root)57.375
SRR2967015Control (Tissue:root)57.174

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.641
SRR9715740Leave24.065
SRR9715741Leave21.944
SRR9715739Root4.423
SRR9715742Root19.570
SRR9715743Root17.393

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h56.602
SRR8749028MeJA induced 9h41.109
SRR8749029MeJA induced 9h37.041
SRR8749030Uninduced23.026
SRR8749031Uninduced23.285
SRR8749032Uninduced15.116

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.589
SRR8400027Control-Root40.405

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved