Gene detail information of Glyur000355s00013935.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67550.10urease
NRKHN34806.10Urease [Glycine soja]
COGYP_003590013.10urease subunit alpha [Kyrpidia tusciae DSM 2912]
Swissprottr|P07374|UREA_CANEN0Urease
trEMBLtr|I1K3K3|I1K3K3_SOYBN0Urease {ECO:0000256|PIRNR:PIRNR001222}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003557567082815+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01427URE EC:3.5.1.5 Purine metabolism map00230
Arginine biosynthesismap00220
Atrazine degradationmap00791


Gene Ontology

biological_process

GO:0006807  nitrogen compound metabolic process

GO:0043419  urea catabolic process


molecular_function

GO:0009039  urease activity

GO:0016151  nickel cation binding

GO:0016787  hydrolase activity

GO:0016810  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000355s00013935.1PF00547.13Urease_gamma11001.40E-42
Glyur000355s00013935.1PF00699.15Urease_beta1332323.00E-38
Glyur000355s00013935.1PF00449.15Urease_alpha2723911.40E-53
Glyur000355s00013935.1PF01979.15Amidohydro_13977001.90E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.323
SRR1783600control23.426
SRR1783602moderate drought stress31.556
SRR1811619moderate drought stress31.317

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.270
DRR006520Root Summer glycyrrhizin high producing strain11.058
DRR006521Root Winter glycyrrhizin high producing strain32.665
DRR006522Root Winter glycyrrhizin high producing strain31.952
DRR006523Root Summer glycyrrhizin low producing strain8.533
DRR006524Root Summer glycyrrhizin low producing strain8.371
DRR006525Leaf Summer glycyrrhizin high producing strain32.430
DRR006526Leaf Summer glycyrrhizin high producing strain32.106

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.044
SRR2868004Drought Stress(Tissue:root)14.129
SRR2967015Control (Tissue:root)13.069

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.015
SRR9715740Leave20.998
SRR9715741Leave21.646
SRR9715739Root4.324
SRR9715742Root28.343
SRR9715743Root25.539

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.411
SRR8749028MeJA induced 9h7.753
SRR8749029MeJA induced 9h14.490
SRR8749030Uninduced2.146
SRR8749031Uninduced2.639
SRR8749032Uninduced2.773

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.128
SRR8400027Control-Root37.430

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved