Gene detail information of Glyur000355s00013942.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67580.20Protein kinase superfamily protein
NRXP_004504468.10PREDICTED: cyclin-dependent kinase G-2-like isoform X1 [Cicer arietinum]
COGYP_003846973.11.00E-23serine/threonine protein kinase [Gallionella capsiferriformans ES-2]
Swissprottr|Q7XUF4|CDKG2_ORYSJ0Cyclin-dependent kinase G-2
trEMBLtr|A0A072TT08|A0A072TT08_MEDTR0Cyclin-dependent kinase {ECO:0000313|EMBL:KEH20557.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00355103343109937-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000355s00013942.1PF00069.20Pkinase3756652.40E-75


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.706
SRR1783600control12.459
SRR1783602moderate drought stress16.558
SRR1811619moderate drought stress16.407

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.138
DRR006520Root Summer glycyrrhizin high producing strain20.196
DRR006521Root Winter glycyrrhizin high producing strain26.250
DRR006522Root Winter glycyrrhizin high producing strain25.183
DRR006523Root Summer glycyrrhizin low producing strain24.013
DRR006524Root Summer glycyrrhizin low producing strain24.249
DRR006525Leaf Summer glycyrrhizin high producing strain17.985
DRR006526Leaf Summer glycyrrhizin high producing strain17.720

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)37.655
SRR2868004Drought Stress(Tissue:root)43.612
SRR2967015Control (Tissue:root)47.580

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave31.714
SRR9715740Leave31.412
SRR9715741Leave45.797
SRR9715739Root10.258
SRR9715742Root32.989
SRR9715743Root29.470

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.759
SRR8749028MeJA induced 9h30.584
SRR8749029MeJA induced 9h23.016
SRR8749030Uninduced16.677
SRR8749031Uninduced27.981
SRR8749032Uninduced24.573

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.615
SRR8400027Control-Root35.978

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved