Gene detail information of Glyur000356s00026087.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17609.2 | 7.00E-33 | HY5-homolog |
| NR | XP_004514285.1 | 4.42E-80 | PREDICTED: LOW QUALITY PROTEIN: transcription factor HY5-like [Cicer arietinum] |
| Swissprot | tr|Q8W191|HYH_ARATH | 7.00E-47 | Transcription factor HY5-like |
| trEMBL | tr|I1MMC8|I1MMC8_SOYBN | 4.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G13570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00356 | 139214 | 141628 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000356s00026087.1 | PF00170.16 | bZIP_1 | 127 | 186 | 3.00E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.084 |
| SRR1783600 | control | 0.115 |
| SRR1783602 | moderate drought stress | 0.039 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.560 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.595 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.004 |
| SRR2967015 | Control (Tissue:root) | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 17.624 |
| SRR9715740 | Leave | 39.303 |
| SRR9715741 | Leave | 15.614 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.080 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.017 |
| SRR8400027 | Control-Root | 0.036 |