Gene detail information of Glyur000357s00018131.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G28980.22.00E-140CDK-activating kinase 1AT
NRACU19808.10unknown [Glycine max]
COGYP_007563291.11.00E-15putative serine/threonine protein kinase [Ilumatobacter coccineus YM16-304]
Swissprottr|O80345|CDKF1_ARATH0Cyclin-dependent kinase F-1
trEMBLtr|I1KIN9|I1KIN9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G09260.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003579271894998-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000357s00018131.1PF00069.20Pkinase201642.40E-29
Glyur000357s00018131.1PF00069.20Pkinase2844133.60E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.617
SRR1783600control4.598
SRR1783602moderate drought stress5.826
SRR1811619moderate drought stress5.706

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.174
DRR006520Root Summer glycyrrhizin high producing strain16.600
DRR006521Root Winter glycyrrhizin high producing strain1.176
DRR006522Root Winter glycyrrhizin high producing strain1.172
DRR006523Root Summer glycyrrhizin low producing strain10.090
DRR006524Root Summer glycyrrhizin low producing strain10.810
DRR006525Leaf Summer glycyrrhizin high producing strain3.331
DRR006526Leaf Summer glycyrrhizin high producing strain3.473

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.350
SRR2868004Drought Stress(Tissue:root)9.614
SRR2967015Control (Tissue:root)8.831

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.873
SRR9715740Leave5.203
SRR9715741Leave8.164
SRR9715739Root10.525
SRR9715742Root9.248
SRR9715743Root9.207

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.800
SRR8749028MeJA induced 9h5.804
SRR8749029MeJA induced 9h3.908
SRR8749030Uninduced2.945
SRR8749031Uninduced0.743
SRR8749032Uninduced1.460

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.544
SRR8400027Control-Root9.630

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved