Gene detail information of Glyur000358s00021171.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G57300.32.00E-116S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NRKHN38004.16.13E-1802-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial [Glycine soja]
COGYP_005079013.12.00E-87Ubiquinone/menaquinone biosynthesis methyltransferase UbiE [Pseudovibrio sp. FO-BEG1]
Swissprottr|Q5JNC0|COQ5_ORYSJ1.00E-1452-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (Precursor)
trEMBLtr|I1KVG9|I1KVG9_SOYBN2.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G22890.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00358130030136276-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K06127COQ5 EC:2.1.1.201 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

molecular_function

GO:0008168  methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000358s00021171.2PF01209.13Ubie_methyltran412922.20E-80


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.457
SRR1783600control15.831
SRR1783602moderate drought stress22.007
SRR1811619moderate drought stress21.585

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.070
DRR006520Root Summer glycyrrhizin high producing strain30.342
DRR006521Root Winter glycyrrhizin high producing strain46.847
DRR006522Root Winter glycyrrhizin high producing strain45.967
DRR006523Root Summer glycyrrhizin low producing strain19.893
DRR006524Root Summer glycyrrhizin low producing strain19.977
DRR006525Leaf Summer glycyrrhizin high producing strain17.931
DRR006526Leaf Summer glycyrrhizin high producing strain17.690

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)46.368
SRR2868004Drought Stress(Tissue:root)56.429
SRR2967015Control (Tissue:root)57.187

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.349
SRR9715740Leave20.196
SRR9715741Leave28.738
SRR9715739Root5.704
SRR9715742Root14.063
SRR9715743Root12.489

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.741
SRR8749028MeJA induced 9h54.585
SRR8749029MeJA induced 9h32.164
SRR8749030Uninduced60.640
SRR8749031Uninduced23.241
SRR8749032Uninduced36.079

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root75.966
SRR8400027Control-Root76.700

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved