Gene detail information of Glyur000359s00016703.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G06060.14.00E-46NAD(P)-binding Rossmann-fold superfamily protein
NRXP_003539545.11.76E-72PREDICTED: tropinone reductase homolog At1g07440 isoform 1 [Glycine max]
COGYP_003390554.15.00E-38short-chain dehydrogenase/reductase SDR [Spirosoma linguale DSM 74]
Swissprottr|Q9ASX2|TRNH1_ARATH2.00E-54Tropinone reductase homolog At1g07440
trEMBLtr|I3SNR4|I3SNR4_MEDTR2.00E-68Uncharacterized protein {ECO:0000313|EMBL:AFK41906.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003595252754448-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08081TR1 EC:1.1.1.206 Tropane, piperidine and pyridine alkaloid biosynthesis map00960


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000359s00016703.1PF13561.1adh_short_C2461799.30E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.918
SRR1783600control3.299
SRR1783602moderate drought stress10.001
SRR1811619moderate drought stress9.702

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.332
DRR006520Root Summer glycyrrhizin high producing strain2.203
DRR006521Root Winter glycyrrhizin high producing strain0.095
DRR006522Root Winter glycyrrhizin high producing strain0.313
DRR006523Root Summer glycyrrhizin low producing strain0.000
DRR006524Root Summer glycyrrhizin low producing strain0.000
DRR006525Leaf Summer glycyrrhizin high producing strain0.153
DRR006526Leaf Summer glycyrrhizin high producing strain0.153

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.773
SRR2868004Drought Stress(Tissue:root)2.408
SRR2967015Control (Tissue:root)1.216

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.059
SRR9715740Leave0.089
SRR9715741Leave0.000
SRR9715739Root0.024
SRR9715742Root0.141
SRR9715743Root0.235

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.806
SRR8749028MeJA induced 9h6.048
SRR8749029MeJA induced 9h4.042
SRR8749030Uninduced39.189
SRR8749031Uninduced28.012
SRR8749032Uninduced16.776

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.138
SRR8400027Control-Root7.128

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved