Gene detail information of Glyur000359s00016705.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G29260.18.00E-112NAD(P)-binding Rossmann-fold superfamily protein
NRXP_004507158.10PREDICTED: tropinone reductase homolog [Cicer arietinum]
COGYP_004658067.12.00E-85Tropinone reductase I [Runella slithyformis DSM 19594]
Swissprottr|Q9ASX2|TRNH1_ARATH1.00E-110Tropinone reductase homolog At1g07440
trEMBLtr|A0A072UKE5|A0A072UKE5_MEDTR1.00E-178Enoyl-(Acyl carrier) reductase {ECO:0000313|EMBL:KEH30187.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold003596370566858-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08081TR1 EC:1.1.1.206 Tropane, piperidine and pyridine alkaloid biosynthesis map00960


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000359s00016705.2PF00106.20adh_short692352.50E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.490
SRR1783600control19.441
SRR1783602moderate drought stress14.020
SRR1811619moderate drought stress13.850

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.197
DRR006520Root Summer glycyrrhizin high producing strain13.286
DRR006521Root Winter glycyrrhizin high producing strain11.160
DRR006522Root Winter glycyrrhizin high producing strain10.842
DRR006523Root Summer glycyrrhizin low producing strain6.490
DRR006524Root Summer glycyrrhizin low producing strain6.441
DRR006525Leaf Summer glycyrrhizin high producing strain9.886
DRR006526Leaf Summer glycyrrhizin high producing strain9.802

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.180
SRR2868004Drought Stress(Tissue:root)10.774
SRR2967015Control (Tissue:root)11.683

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.248
SRR9715740Leave7.965
SRR9715741Leave6.601
SRR9715739Root3.110
SRR9715742Root6.346
SRR9715743Root6.907

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.015
SRR8749028MeJA induced 9h12.158
SRR8749029MeJA induced 9h18.010
SRR8749030Uninduced24.926
SRR8749031Uninduced8.659
SRR8749032Uninduced4.560

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.207
SRR8400027Control-Root20.093

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved