Gene detail

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Gene detail information of Glyur000360s00014602.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G63700.1	0	Protein kinase superfamily protein
NR	XP_004503703.1	0	PREDICTED: serine/threonine-protein kinase pakF-like isoform X1 [Cicer arietinum]
COG	NP_865088.1	3.00E-26	serine/threonine protein kinase [Rhodopirellula baltica SH 1]
Swissprot	tr\|Q9CAD5\|YODA_ARATH	0	Mitogen-activated protein kinase kinase kinase YODA
trEMBL	tr\|A0A072TW23\|A0A072TW23_MEDTR	0	ATP-binding protein {ECO:0000313\|EMBL:KEH21078.1}

Sequence

Transcript Sequence

>Glyur000360s00014602.1
ATGCGGACATGGTGGGGAAAGCCTTCGTCCAAAGAGGCGAAGAGGAAGACAAACAGGGAAAGTATTTTTGATACAATACAGCGGAAATTAAAGAATGCTTCCGAAGAGAAGCACAACTATAAATCAGGAGGATCTAGGAAACATCGTCATGATGCTATCTCAAAGAAGGGATCTAAATCCTTCGAACCTTNGAGATCACCATCACCCTCTACACATGTGTCCCGCTGTCTAAGTTTTGCAGAAAGCCGTCATTGTCAGCCACTCCCATTGCCGGCCTCGCGCCTTCCTACTGTTACTGATGCAAATTCTGGAATTATTTTAACGCCAAAACCAGAAAGAGCCACTGAAGATCCTACATCTAGACCATCTGTATATTTTCCCCTCCCGGAACCTGGTTACGTATCTAAAAGGCTCCAACTTGCAGATGCGGAAGGAGATTTAGCCACTGCATCTGTTTTCAGTGACAGCTCTATTGATAGTGGTGACTCATCTGATTCGCATCTTGTTAGTCCTCTGGCATCTGACTGTGAAAATGGAAACAGAGCCACCATTAAAAGTTCTTTCAGGGTGGTGCACAAGGATCAATCATTTATTACTATTGAAAGAAAACCAAGAGCATCCTCAAAACCAGCTCATCAATTGTGCAACAAGAAGCTTTTATCTATCTCTCCAAAAGGGGTTCCTTTGCATCTGCAAGTAGCTCGTTCAGGTGGTTTGCGGAGTGCTCCAGATAGTTCAATGTCAAGTCCTTCTAGAAGTCCAATGAGAGCATTTGGTCCAGAGCAAGTGTTGAACTCTGGATTCTGGACAGGAAAACCTCATCCAGATATAGCTTCTGGGCACTGCTCTAGTCCAGGTTCAGGTCATAATTCTAATCATAATTCGATTCGTGGAGATCGNTCAGGACAGGTATTTAGGCCAAACAACAAGTGTAGCGCTGAGTGTTCCCCAATACCTAGTCCCAGAATGGCAAGCCCTGGTCCCAGTTCCAGGATACAGAGTTGTACTGTCACCCCTCTGCATCCTCAAGCTGGAGGTACTGCAGTGGAGTTGACTACAAGACGTCTTGATGTCATGAAACAACAAACTCATCGGTTACCGCTTCCTCCAATAACAGTCACTAAATCTTGTCCATTTTCCCCAACCTATTCTGCATCCACAACTCCTTCAGCCCCTCGTAGTCCTGCCAGAGCAGAAAATCCAACAAGCCCAGGTTCACGCTGGACAAAGGGNCAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTCGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTTTCAGATGATGCTAAATCAAGGGAATGCGCACAACAACTTGGCCAAGAAATTGCACTGCTAAGTCAGTTGCGGCATCCAAATATAGTCCAGTATTATGGATCTGAGACGGTAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAACTGGTTCGAGAATATGGGCAATTAGGTGAAATTGCGATTCGTAATTACACTCGGCAAATTCTATCAGGACTTNCATATTTGCATGCTAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAATGGACAGATAAAATTGGCAGATTTTGGGATGGCAAAGCATGCTGTGGCATCTAATATTTTGCCTATCTGGAATAATTTGCAGATAAGCGGGCAGTCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCAGATGGTTGTAATCTTGCTGTTGATATATGGAGTCTGGGCTGCACTGTTTTGGAGATGGCAACATCAAAACCTCCTTGGAGCCAGTATGAGGGGGTTGCTGCTATGTTTAAGATTGGGAACAGCAAGGAACTTCCTACAATTCCAGATCATCTATCAGAAGAAGGAAAAGATTTTGTCAGGCTTTGTTTGCGAAGGGAACCACTAGATCGTCCCTCAGCTGCTCAACTTCTAGAGCATCCGTTTGTTAAAAGTGCTTTGCTGGAAAGACACATTCTGACTGCTGATCCTTCAGAAGCACCATCTGCCGTTATAAATGCAGTGAGATCTCTGGCCATTGGACCTGCGAAACATAATGTATGCTTGGACTTGGGAGCAGCTGGTATCTATCCCTCTAGAAGCTTCAGAATTGGTTCTGGATCAAGTGATGCACTTAAACCAAGGAACGTCTCATGTCCCGTTTCTCCGTCTGGGAGCCTACTTTTGGCTTCTAGATCATTGCATGCGAGTGGAAGGATGTCTCCCTCTCCAACATCTAGTCCTCATACTGCATCTGGCCCATCTTCCCCGCTCATCAGTGGTGGTTGTGATGGGGCGATCCCATTTCACCAAACAAAGCAACCAATATTCTCATATGAAGGTGTGGGTATGATACAAAAGGAACCAATATTCTCATATGAAGGTGTGGGTATGATACAAAAGTCTCAGATTGGTTTTCAGTCAAATGGAACTACTGCTCATCACGGGTCAAAGCATGATAAGTTATGGAGAAATACACAAACTAGGCATTACCGGGATATAATTCCATCNGATAATGATGTGCTTGCAATCCATAATAGGAGGGCCGTCGAAGGAGACCCAAATGAATTTCGTGATAGGAAATCATATTTGGCNGATCGAGACCCAAGAGAATATCGTGATAGGAAGTCATATTTGGCTGATCGTGTGCCGCAACAACAGCTGNTGAGGGATTATGCACGGCCAAATGCATACCTAGATCATAAGCCCAGTTCCCCAATGCATGGTGGTCGCATGAATGGCCGATGTGANTTCCCTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00360	2397	7238	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K20717	YDA	EC:2.7.11.25	MAPK signaling pathway - plant	map04016

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000360s00014602.1	PF00069.20	Pkinase	409	678	2.10E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.313
SRR1783600	control	1.356
SRR1783602	moderate drought stress	0.771
SRR1811619	moderate drought stress	0.825

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.104
DRR006520	Root Summer glycyrrhizin high producing strain	1.170
DRR006521	Root Winter glycyrrhizin high producing strain	0.117
DRR006522	Root Winter glycyrrhizin high producing strain	0.115
DRR006523	Root Summer glycyrrhizin low producing strain	1.112
DRR006524	Root Summer glycyrrhizin low producing strain	1.172
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.733
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.753

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.961
SRR2868004	Drought Stress(Tissue:root)	0.842
SRR2967015	Control (Tissue:root)	0.704

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.725
SRR9715740	Leave	0.394
SRR9715741	Leave	0.302
SRR9715739	Root	0.907
SRR9715742	Root	0.903
SRR9715743	Root	1.262

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.964
SRR8749028	MeJA induced 9h	0.286
SRR8749029	MeJA induced 9h	0.327
SRR8749030	Uninduced	0.007
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.035

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.802
SRR8400027	Control-Root	1.927