Gene detail information of Glyur000360s00014624.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G23100.30glutamate-cysteine ligase
NRXP_004503722.10PREDICTED: glutamate--cysteine ligase, chloroplastic-like [Cicer arietinum]
COGYP_002299789.10glutamate--cysteine ligase [Rhodospirillum centenum SW]
Swissprottr|Q9ZNX6|GSH1_MEDTR0Glutamate--cysteine ligase, chloroplastic (Precursor)
trEMBLtr|V7CPB1|V7CPB1_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW32052.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00360111001117573+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01919gshA EC:6.3.2.2 Cysteine and methionine metabolism map00270
Glutathione metabolismmap00480


Gene Ontology

biological_process

GO:0006750  glutathione biosynthetic process

GO:0042398  cellular modified amino acid biosynthetic process


molecular_function

GO:0004357  glutamate-cysteine ligase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000360s00014624.1PF04107.8GCS21164061.10E-91


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.310
SRR1783600control19.414
SRR1783602moderate drought stress24.441
SRR1811619moderate drought stress24.324

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain34.717
DRR006520Root Summer glycyrrhizin high producing strain34.139
DRR006521Root Winter glycyrrhizin high producing strain28.777
DRR006522Root Winter glycyrrhizin high producing strain27.786
DRR006523Root Summer glycyrrhizin low producing strain48.299
DRR006524Root Summer glycyrrhizin low producing strain48.564
DRR006525Leaf Summer glycyrrhizin high producing strain23.424
DRR006526Leaf Summer glycyrrhizin high producing strain22.773

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)86.245
SRR2868004Drought Stress(Tissue:root)201.203
SRR2967015Control (Tissue:root)191.253

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.498
SRR9715740Leave90.364
SRR9715741Leave67.034
SRR9715739Root20.024
SRR9715742Root53.280
SRR9715743Root46.536

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h184.464
SRR8749028MeJA induced 9h297.136
SRR8749029MeJA induced 9h256.401
SRR8749030Uninduced485.050
SRR8749031Uninduced279.226
SRR8749032Uninduced297.952

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root84.701
SRR8400027Control-Root57.837

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved