Gene detail information of Glyur000360s00014626.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G63500.1 | 0 | Protein kinase protein with tetratricopeptide repeat domain |
NR | AET04990.2 | 0 | TPR domain kinase [Medicago truncatula] |
COG | YP_003169103.1 | 1.00E-11 | serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] |
Swissprot | tr|Q9FHD7|Y5126_ARATH | 0 | Probable serine/threonine-protein kinase At5g41260 |
trEMBL | tr|G7LHC7|G7LHC7_MEDTR | 0 | TPR domain kinase {ECO:0000313|EMBL:AET04990.2} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00360 | 124223 | 130269 | - |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:1.16.1 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K14500 | BSK | EC:2.7.11.1 | Plant hormone signal transduction | map04075 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000360s00014626.1 | PF07714.12 | Pkinase_Tyr | 72 | 310 | 1.10E-27 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 9.555 |
SRR1783600 | control | 9.580 |
SRR1783602 | moderate drought stress | 7.614 |
SRR1811619 | moderate drought stress | 7.523 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 23.583 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 24.645 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 55.418 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 54.302 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 34.446 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 33.486 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.789 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.997 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 26.216 |
SRR2868004 | Drought Stress(Tissue:root) | 36.215 |
SRR2967015 | Control (Tissue:root) | 29.394 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 35.006 |
SRR9715740 | Leave | 33.950 |
SRR9715741 | Leave | 47.522 |
SRR9715739 | Root | 12.207 |
SRR9715742 | Root | 25.511 |
SRR9715743 | Root | 21.025 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 99.085 |
SRR8749028 | MeJA induced 9h | 85.590 |
SRR8749029 | MeJA induced 9h | 64.099 |
SRR8749030 | Uninduced | 64.815 |
SRR8749031 | Uninduced | 82.013 |
SRR8749032 | Uninduced | 75.696 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 29.479 |
SRR8400027 | Control-Root | 27.287 |