Gene detail information of Glyur000360s00014626.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63500.10Protein kinase protein with tetratricopeptide repeat domain
NRAET04990.20TPR domain kinase [Medicago truncatula]
COGYP_003169103.11.00E-11serine/threonine protein kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
Swissprottr|Q9FHD7|Y5126_ARATH0Probable serine/threonine-protein kinase At5g41260
trEMBLtr|G7LHC7|G7LHC7_MEDTR0TPR domain kinase {ECO:0000313|EMBL:AET04990.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00360124223130269-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.16.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14500BSK EC:2.7.11.1 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000360s00014626.1PF07714.12Pkinase_Tyr723101.10E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.555
SRR1783600control9.580
SRR1783602moderate drought stress7.614
SRR1811619moderate drought stress7.523

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.583
DRR006520Root Summer glycyrrhizin high producing strain24.645
DRR006521Root Winter glycyrrhizin high producing strain55.418
DRR006522Root Winter glycyrrhizin high producing strain54.302
DRR006523Root Summer glycyrrhizin low producing strain34.446
DRR006524Root Summer glycyrrhizin low producing strain33.486
DRR006525Leaf Summer glycyrrhizin high producing strain12.789
DRR006526Leaf Summer glycyrrhizin high producing strain11.997

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.216
SRR2868004Drought Stress(Tissue:root)36.215
SRR2967015Control (Tissue:root)29.394

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave35.006
SRR9715740Leave33.950
SRR9715741Leave47.522
SRR9715739Root12.207
SRR9715742Root25.511
SRR9715743Root21.025

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h99.085
SRR8749028MeJA induced 9h85.590
SRR8749029MeJA induced 9h64.099
SRR8749030Uninduced64.815
SRR8749031Uninduced82.013
SRR8749032Uninduced75.696

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root29.479
SRR8400027Control-Root27.287