Gene detail information of Glyur000360s00014628.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G63460.13.00E-65glutathione peroxidase 8
NRAFK48933.15.96E-93unknown [Lotus japonicus]
COGYP_005034594.12.00E-49glutathione peroxidase [Bacteriovorax marinus SJ]
Swissprottr|Q8LBU2|GPX8_ARATH2.00E-82Probable glutathione peroxidase 8
trEMBLtr|I3T8U1|I3T8U1_LOTJA2.00E-93Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00360141736143894-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00432gpx EC:1.11.1.9 Arachidonic acid metabolism map00590
Glutathione metabolismmap00480
Thyroid hormone synthesismap04918


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004602  glutathione peroxidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000360s00014628.1PF00255.14GSHPx121205.90E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.108
SRR1783600control5.729
SRR1783602moderate drought stress9.958
SRR1811619moderate drought stress9.850

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.431
DRR006520Root Summer glycyrrhizin high producing strain4.876
DRR006521Root Winter glycyrrhizin high producing strain24.753
DRR006522Root Winter glycyrrhizin high producing strain24.193
DRR006523Root Summer glycyrrhizin low producing strain8.826
DRR006524Root Summer glycyrrhizin low producing strain9.436
DRR006525Leaf Summer glycyrrhizin high producing strain7.337
DRR006526Leaf Summer glycyrrhizin high producing strain7.440

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.257
SRR2868004Drought Stress(Tissue:root)29.722
SRR2967015Control (Tissue:root)29.079

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.094
SRR9715740Leave16.962
SRR9715741Leave23.144
SRR9715739Root12.926
SRR9715742Root12.709
SRR9715743Root14.260

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.634
SRR8749028MeJA induced 9h6.434
SRR8749029MeJA induced 9h9.230
SRR8749030Uninduced8.271
SRR8749031Uninduced6.405
SRR8749032Uninduced10.344

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.189
SRR8400027Control-Root22.226

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved