Gene detail information of Glyur000360s00014631.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11600.11.00E-78glutathione peroxidase 6
NRXP_004503771.18.43E-122PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial-like [Cicer arietinum]
COGYP_005516832.15.00E-58glutathione peroxidase [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|Q06652|GPX4_CITSI4.00E-102Probable phospholipid hydroperoxide glutathione peroxidase
trEMBLtr|Q56VU1|Q56VU1_LOTJA3.00E-121Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00360146701149665-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00432gpx EC:1.11.1.9 Arachidonic acid metabolism map00590
Glutathione metabolismmap00480
Thyroid hormone synthesismap04918


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004602  glutathione peroxidase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000360s00014631.2PF00255.14GSHPx801885.30E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control569.419
SRR1783600control570.687
SRR1783602moderate drought stress401.596
SRR1811619moderate drought stress400.814

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain388.370
DRR006520Root Summer glycyrrhizin high producing strain385.723
DRR006521Root Winter glycyrrhizin high producing strain813.113
DRR006522Root Winter glycyrrhizin high producing strain790.789
DRR006523Root Summer glycyrrhizin low producing strain516.356
DRR006524Root Summer glycyrrhizin low producing strain515.412
DRR006525Leaf Summer glycyrrhizin high producing strain241.066
DRR006526Leaf Summer glycyrrhizin high producing strain237.694

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)212.358
SRR2868004Drought Stress(Tissue:root)267.992
SRR2967015Control (Tissue:root)268.000

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1045.811
SRR9715740Leave642.780
SRR9715741Leave1137.252
SRR9715739Root337.366
SRR9715742Root559.854
SRR9715743Root512.739

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1309.447
SRR8749028MeJA induced 9h1139.085
SRR8749029MeJA induced 9h2086.643
SRR8749030Uninduced1322.915
SRR8749031Uninduced1332.845
SRR8749032Uninduced979.761

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root267.025
SRR8400027Control-Root289.042

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved